Biohazard

Problem: Pathologist is limited to a single biopsy dataset and repeating the work of their colleagues. Limited data access leads to missed opportunities for better treatments and directly impacting people lives.

Solution: Biohazard allows pathologists: Upload biopsy results Unify biopsy formats across different softwares Annotate tissue morphologically Enrich biopsy with past annotations and 3rd party datasets

Impact: Fully Encrypted at rest and in transit Security is our high-priority - we can integrate with existing system (SAML) Scalable to hundreds of terabytes Cost efficient - $0.028 per 1000 biopsies processed Already partially HIPPA compliant Coverage for multiple laboratories

Feasibility & financials: Fully Encrypted at rest and in transit Security is our high-priority - we can integrate with existing system (SAML) Scalable to hundreds of terabytes Cost efficient - $0.028 per 1000 biopsies processed Already partially HIPPA compliant Coverage for multiple laboratories

What is new about your solution?: cost efficient ready to deploy

What you have built at the hackathon - text explanation + code (e.g. GitHub link): Authentication and authorization Excel parser with validation on columns Frontend app for annotating biopsy reports Appsync backend to persist annotations Archive data late to share annotated biopsy reports Showing relevant annotated reports and liking it with current report Used and linked together about 35 resources on AWS https://github.com/biohazard-hackathon

What you had before the hackathon, please mention open source as well: We had multiple projects built from the past from which we could be inspired to get configuration or setting up aws resources but the mapping of all the resources, frontend and backend was all built here during the hackathon

What comes next and what you wish to achieve: We are hoping to continue with this project ideally as part of the incubator *caelestinus. We hope to be able to work closely with both astra zeneca as well as the doctors to truly matchtheir needs. We see the power mainly in the sharing of data across laboratories in czech republic with potential to reach across the globe. We see huge potential in leveraging the power of cloud and we believe that we can offer the right expertise to implement a scalable, secure and reliable solution

Video: https://www.youtube.com/embed/Sb8H_XyxKn8