ViDí ŠtaFEL
Video
Project / product name: CzechGEN
Link to the project: http://github.com/vikvam/hackhealth23
Team leader: Ondřej Baštař
Challenge: 1. Icebreaker AZ23
Problem: Genomic research in the Czech Republic faces a critical hurdle—lack of a unified Next-Generation Sequencing (NGS) database. Absence of a central platform obstructs understanding of Czech-specific genome mutations, hindering clinical studies and complicating medication identification. Inefficient communication among labs worsens the situation, scattering data across various XLSX files and formats, impeding comprehensive analysis.
Solution: Our advanced genomic data management solution tackles these complexities. A robust data model standardizes NGS data, ensuring coherence. The platform offers local storage, addressing legal concerns. FHIR adoption ensures consistent standardization. The solution includes a unified Czech portal for NGS data, centralizing and offering a user-friendly interface. Seamlessly integrating with labs, it revolutionizes genomic research with efficiency and accessibility.
Impact: The Czech-specific genomic portal revolutionizes research and healthcare by empowering researchers with deeper insights into population-specific mutations. Enhanced clinical study access informs medication development, fostering targeted therapeutic solutions. Standardization and FHIR compatibility enable seamless data sharing, improving pathologists' effectiveness and elevating patient care standards.
Feasibility & financials: Our solution demonstrates exceptional feasibility, with a swift proto-prototype in 48 hours showcasing efficiency. Leveraging FHIR ensures scalability and interoperability. Integration with InterSystems products guarantees smooth implementation. Minimal workflow adjustment yields a user-friendly system, ensuring easy adoption and immediate benefits. The concept's agility and efficiency make it a viable and transformative solution.
What is new about your solution?: Application to Czech healthcare system.
What you have built at the hackathon - text explanation + code (e.g. GitHub link): We build a working prototype of the platform / portal.
Everything in the video.
We didn't mockup.
github.com/vikvam/hackhealth23
What you had before the hackathon, please mention open source as well: Nothing, we had no knowledge of the issue before the hackathon.
What comes next and what you wish to achieve: We want to help improve the situation. We can cooperate with th Patologická společnost on implementing the idea.